Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015788908.1_cds_XP_016488729.1_749
CDS Infomation

[gene=LOC107808628] [db_xref=GeneID:107808628] [protein=protein FRIGIDA-like isoform X2] [protein_id=XP_016488729.1] [location=join(22027..22972,30276..30451,30599..31588,32102..32113)] [gbkey=CDS]
Sequence

ATGGCTAAACCAGCAGATACCGCCGCAGCTGCGACACCTCAATCACAACAAACACTTAAC
GATTCGCTGCAGAATGTAACCAAACAGTCGGAATTTCAGCAACCACCAACACATTCCCAG
GATGACTCAATTTCCAATCTCCGCAAACTCACCGACTCCCTCTCAGCATTCCAACGCTGC
TTCGCTGACCTATATCAACACATTGACTCAATTCGAACCATAATCGACTCTATGCTTCCC
CCACTTACAACCAATACTACTCCTTTACCCACGTCATTACCGCCACCAGCCCCAGCCGCA
GAGCCGGAACCATCTTGGGAATCTGACCCCTCTGAAGAAGAAGTAGAAGGAGAAGGAGAA
GGAGAAGAAAAAGAAAAGGAAGAAGAAGTGAAATCCCCTCCTCATCCAGAGCTGAAATCC
GCTCATCTTGCAGAGCTGGAGAGCCTCTGCAAAATGATGAGTGGTCGTCATCTACGGAGG
TACATGGGAATGCATCTCTCAGATATAAAAGGACTGCTGGAACAAGTCCCTAAGGCATTG
AGACTCTCCCCCAATCCAGCAAGGCTTGTATTGGAATGTGTCGGCAAGTTTTATTCTCAA
AAGGGCAGTGTGTTTGTTAAGTGCTCACACATGGTCCGTTCAAGGCTGGCTTCTGTATTA
GTTTTGGAATGCTTCTTGTTGATGGGAATCAACGACGAGATTGAGAAAGGGGTGAAGCAA
GAGGCGGAGCGGGCAGCTTTAGCTTGGAGAAAGAGGTTGATTGCCGAAGGAGGTGTACTT
AAGGCTAAGGAAATTGATGCCCGGGGTTTGTTGATGCTTATTGCGTGTTTCGGGATTCCA
GGAGGATTTAGAAATGAAGATATCAGGGATTTGCTTCAGGTAAGTTGCATCAAGCGGTAT
TATCGTGCCCTCCGGAGATCAAATGTCCTCGTGGCAAAGATTCCAGAAATAATAGAGGGG
ATGCTGAAGCAAAAGATGGAAGTTGACGCTGTTCATATTGCCTATACTTTTGGATTTGAG
GACAGATTTAATCCTCAGAGACTTTTGACATCATTTTTACTAGATACTAAAGAGTCATTG
AAGAAAATGAAGGAAAACTCACATGGTTCACATGCTGCTGTGAATGAAGCAAAAAGGAAG
CATTTGTTTGCTCTGAAATATCTCATCAAATGTTTGGAACGCCATGATACCGATCCTTCA
AAACTTCTTCCTGGATGGCAAATCAATGAGCAGATAATGAAGTTGGAGAAAGAAATTGTT
GAATTAGATAAGCAGACAGGTGGGAAGATGGCACAAAAGAGAAAACGTGATGAAACTGAG
TCGTCGAGAAGGTTCAGAAATAAAGAAGCAAAACGGTCGCGTATTCCACCATGGCTATGG
AAGCAAAGAGTTGTTAATCATGTTGATAGTGACTGCACCTTGCTAGAACGTCAAAATGCT
GGCCATGTTCATGGTTATACTGTGTCCTCATCAGTATTGCATGGACCTGTTGCCGGCTCG
ATGCATGAAAATGTTGTTGGCTCCCTTGCAGGAACTGTGGCCATGGGTCGAGATGGAGCA
GGGATATCAGCAAGTGTCGATGGTATTCAAGCAGATATATCAGAAGGCATGGAAATTGTT
CATCAAGGAGCTTCATATGCTGGAGGTCATGGAGGGACTCTAGTTGATCGTACACCTGGG
CAAATAGGGATTCATACTGGTCAGTCATATGGATGGCGTGGGAATGCAGCCGTGTATGAC
GGACTGGCCTCCTGCAGCTATGCTTATAGGCCATCATCATACGTGGAAGGCTCTACGGGC
TTGCCAAACAGCCAACCCAGTGATCCTCATAGGTCACCACCATACTTGGAAAGTTCTGCG
GGGTTGCCAAATGCCACACATAGTGATGCTTATAGGCCACCACCATACTTGGAAGGTTCT
GCAGGGTTGCCAAATGCCACACATAGTGATGCTTATAGGCCACCACCATACTTGGAAGGT
TCTGCAGGGTTGCCAAATGCCACACATAGTGATGCTTATAGGCCACCACCATACTTGGAG
GGTTCTGCGGGGTTGCCAAATGCAATACCTGGTGATGTTGCTAGCCGGAGCTCTGCATCT
GATATCTACCAGGCATTTCTTTGA

Peptide Sequence

PEP ID

XP_016488729.1
PEP Infomation

PREDICTED: protein FRIGIDA-like isoform X2 [Nicotiana tabacum]
Sequence

MAKPADTAAAATPQSQQTLNDSLQNVTKQSEFQQPPTHSQDDSISNLRKLTDSLSAFQRC
FADLYQHIDSIRTIIDSMLPPLTTNTTPLPTSLPPPAPAAEPEPSWESDPSEEEVEGEGE
GEEKEKEEEVKSPPHPELKSAHLAELESLCKMMSGRHLRRYMGMHLSDIKGLLEQVPKAL
RLSPNPARLVLECVGKFYSQKGSVFVKCSHMVRSRLASVLVLECFLLMGINDEIEKGVKQ
EAERAALAWRKRLIAEGGVLKAKEIDARGLLMLIACFGIPGGFRNEDIRDLLQVSCIKRY
YRALRRSNVLVAKIPEIIEGMLKQKMEVDAVHIAYTFGFEDRFNPQRLLTSFLLDTKESL
KKMKENSHGSHAAVNEAKRKHLFALKYLIKCLERHDTDPSKLLPGWQINEQIMKLEKEIV
ELDKQTGGKMAQKRKRDETESSRRFRNKEAKRSRIPPWLWKQRVVNHVDSDCTLLERQNA
GHVHGYTVSSSVLHGPVAGSMHENVVGSLAGTVAMGRDGAGISASVDGIQADISEGMEIV
HQGASYAGGHGGTLVDRTPGQIGIHTGQSYGWRGNAAVYDGLASCSYAYRPSSYVEGSTG
LPNSQPSDPHRSPPYLESSAGLPNATHSDAYRPPPYLEGSAGLPNATHSDAYRPPPYLEG
SAGLPNATHSDAYRPPPYLEGSAGLPNAIPGDVASRSSASDIYQAFL

Transcript Sequence

Gene sequence data has not been registered.